• Select the area you would like to search.
  • ACTIVE INVESTIGATIONS Search for current projects using the investigator's name, institution, or keywords.
  • EXPERTS KNOWLEDGE BASE Enter keywords to search a list of questions and answers received and processed by the ADNI team.
  • ADNI PDFS Search any ADNI publication pdf by author, keyword, or PMID. Use an asterisk only to view all pdfs.


Question Posted 11/10/15:
Dear sir, I am new in plink analysis,
I downloaded ADNI1 dataset.

How can I search in plink files for location (start / end)of gene for example CD2AP gene in which its location on chromosome 6: base pairs 47,477,745 to 47,627,262

Thanks in advance
Response posted 11/10/15 by Sungeun Kim:
I am not quite sure if you want to identify SNPs located in a gene or not. If that is what you want, PLINK .bim file contains SNP annotation with their chromosomal location and chromosome information. But if you want to know gene information from PLINK file, it is not possible because PLINK does not maintain gene information.
Go back to list of topics >