• Select the area you would like to search.
  • ACTIVE INVESTIGATIONS Search for current projects using the investigator's name, institution, or keywords.
  • EXPERTS KNOWLEDGE BASE Enter keywords to search a list of questions and answers received and processed by the ADNI team.
  • ADNI PDFS Search any ADNI publication pdf by author, keyword, or PMID. Use an asterisk only to view all pdfs.


WGS Data Update (Revised VCF files)
Thu, Dec 18, 2014

Revised VCF files from ADNI whole genomes re-aligned and re-called using Broad best practices (BWA and GATK-haplotype caller) are now available from the Download -> Genetic Data section of the ADNI repository.  These files contain the ADNI participant ID rather than the sample ID.  The previous version that contained sample ID have been removed.

The datasets are named “ADNI WGS Data – GATK SNV+Indel call chr# of 23“.  For technical questions about the production of the VCF files, please contact Sheila Sutti at ssutti@genetics.med.harvard.edu.

This post was written by: - who has written 120 posts on ADNI.

Comments are closed.