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Principal Investigator  
Principal Investigator's Name: Sophia Frangou
Institution: Icahn School of Medicine at Mount Sinai
Department: Psychiatry
Country:
Proposed Analysis: Background: Neuropsychiatric disorders show significant inter-individual variability that is poorly understood but may reflect differences in disease stage. Machine learning approaches are increasingly being used to derive neurosignatures with diagnostic and prognostic value for neuropsychiatric disorders. Deep-learning methods have recently been used to identify distinct disease subtypes that may correspond to different disease progression patterns. The aim of this study is to conduct a comparative evaluation of three widely used algorithms that have been proposed for the detection of disease stages based on neuroimaging data, namely the Smile-GAN (SeMI-supervised cLustEring via Generative Adversarial Network) and GANCMLAE(Generative Adversarial Network constrained Multiple loss autoencoder), which are both semi-supervised deep-learning algorithms, and SuStaIn (Subtype and Stage Inference), a supervised clustering and pathway modeling algorithm. Performance of these algorithms will be compared in terms of accuracy and interpretability using structural neuroimaging data from the ADNI dataset and simulated data. Clinical and cognitive data from the ADNI dataset will be used for external validation of the disease stages identified by each of the three algorithms.
Additional Investigators  
Investigator's Name: Shalaila Haas
Proposed Analysis: Background: Neuropsychiatric disorders show significant inter-individual variability that is poorly understood but may reflect differences in disease stage. Machine learning approaches are increasingly being used to derive neurosignatures with diagnostic and prognostic value for neuropsychiatric disorders. Deep-learning methods have recently been used to identify distinct disease subtypes that may correspond to different disease progression patterns. The aim of this study is to conduct a comparative evaluation of three widely used algorithms that have been proposed for the detection of disease stages based on neuroimaging data, namely the Smile-GAN (SeMI-supervised cLustEring via Generative Adversarial Network) and GANCMLAE(Generative Adversarial Network constrained Multiple loss autoencoder), which are both semi-supervised deep-learning algorithms, and SuStaIn (Subtype and Stage Inference), a supervised clustering and pathway modeling algorithm. Performance of these algorithms will be compared in terms of accuracy and interpretability using structural neuroimaging data from the ADNI dataset and simulated data. Clinical and cognitive data from the ADNI dataset will be used for external validation of the disease stages identified by each of the three algorithms.
Investigator's Name: Ruiyang Ge
Proposed Analysis: Background: Neuropsychiatric disorders show significant inter-individual variability that is poorly understood but may reflect differences in disease stage. Machine learning approaches are increasingly being used to derive neurosignatures with diagnostic and prognostic value for neuropsychiatric disorders. Deep-learning methods have recently been used to identify distinct disease subtypes that may correspond to different disease progression patterns. The aim of this study is to conduct a comparative evaluation of three widely used algorithms that have been proposed for the detection of disease stages based on neuroimaging data, namely the Smile-GAN (SeMI-supervised cLustEring via Generative Adversarial Network) and GANCMLAE(Generative Adversarial Network constrained Multiple loss autoencoder), which are both semi-supervised deep-learning algorithms, and SuStaIn (Subtype and Stage Inference), a supervised clustering and pathway modeling algorithm. Performance of these algorithms will be compared in terms of accuracy and interpretability using structural neuroimaging data from the ADNI dataset and simulated data. Clinical and cognitive data from the ADNI dataset will be used for external validation of the disease stages identified by each of the three algorithms.
Investigator's Name: Yuetong Yu
Proposed Analysis: Background: Neuropsychiatric disorders show significant inter-individual variability that is poorly understood but may reflect differences in disease stage. Machine learning approaches are increasingly being used to derive neurosignatures with diagnostic and prognostic value for neuropsychiatric disorders. Deep-learning methods have recently been used to identify distinct disease subtypes that may correspond to different disease progression patterns. The aim of this study is to conduct a comparative evaluation of three widely used algorithms that have been proposed for the detection of disease stages based on neuroimaging data, namely the Smile-GAN (SeMI-supervised cLustEring via Generative Adversarial Network) and GANCMLAE(Generative Adversarial Network constrained Multiple loss autoencoder), which are both semi-supervised deep-learning algorithms, and SuStaIn (Subtype and Stage Inference), a supervised clustering and pathway modeling algorithm. Performance of these algorithms will be compared in terms of accuracy and interpretability using structural neuroimaging data from the ADNI dataset and simulated data. Clinical and cognitive data from the ADNI dataset will be used for external validation of the disease stages identified by each of the three algorithms.
Investigator's Name: Kevin Yu
Proposed Analysis: Background: Neuropsychiatric disorders show significant inter-individual variability that is poorly understood but may reflect differences in disease stage. Machine learning approaches are increasingly being used to derive neurosignatures with diagnostic and prognostic value for neuropsychiatric disorders. Deep-learning methods have recently been used to identify distinct disease subtypes that may correspond to different disease progression patterns. The aim of this study is to conduct a comparative evaluation of three widely used algorithms that have been proposed for the detection of disease stages based on neuroimaging data, namely the Smile-GAN (SeMI-supervised cLustEring via Generative Adversarial Network) and GANCMLAE(Generative Adversarial Network constrained Multiple loss autoencoder), which are both semi-supervised deep-learning algorithms, and SuStaIn (Subtype and Stage Inference), a supervised clustering and pathway modeling algorithm. Performance of these algorithms will be compared in terms of accuracy and interpretability using structural neuroimaging data from the ADNI dataset and simulated data. Clinical and cognitive data from the ADNI dataset will be used for external validation of the disease stages identified by each of the three algorithms.
Investigator's Name: Nicole Sanford
Proposed Analysis: Background: Neuropsychiatric disorders show significant inter-individual variability that is poorly understood but may reflect differences in disease stage. Machine learning approaches are increasingly being used to derive neurosignatures with diagnostic and prognostic value for neuropsychiatric disorders. Deep-learning methods have recently been used to identify distinct disease subtypes that may correspond to different disease progression patterns. The aim of this study is to conduct a comparative evaluation of three widely used algorithms that have been proposed for the detection of disease stages based on neuroimaging data, namely the Smile-GAN (SeMI-supervised cLustEring via Generative Adversarial Network) and GANCMLAE(Generative Adversarial Network constrained Multiple loss autoencoder), which are both semi-supervised deep-learning algorithms, and SuStaIn (Subtype and Stage Inference), a supervised clustering and pathway modeling algorithm. Performance of these algorithms will be compared in terms of accuracy and interpretability using structural neuroimaging data from the ADNI dataset and simulated data. Clinical and cognitive data from the ADNI dataset will be used for external validation of the disease stages identified by each of the three algorithms.